species:   Artha
pid:       MI0005404
parent:    ath-MIR849
paralog:   
locus:     3:16072449-16072637
matures:   ['UAACUAAACAUUGGUGUAGUA', 'CUAGACCAAUGUUUAGUUAGU']
srr:       SRR9216049
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram 3:16072449-16072637

0 out of bounds
4 alignments
1 proper strand
1 stranded perfect matches

                   **************************************                                                                           **************************                               
UAAUUUGGUUAAAUGUUUUCAACAUUUUUUAUUUAUUUAUGAUUGGACAACUACUAGACCAAUGUUUAGUUAGUACAUCCAAUGUUAUAAGUACAAAAUAAUAUGUGUUGGAUCUACUAACUAAACAUUGGUGUAGUAGUUGUCCGACUCUAUUGUUGGGAGCGAGAAGAUUGAUCCCUGGUUUAAUUG
..............((((((((((................((((((((((((((((.((((((((((((((((((.((((((((((((.........)))))....))))))).)))))))))))))))))).)))))))))))))).))...)))))))))).....((((((........)))))).
---------------------------------------------------------------------------------------------------------------------UAACUAAACAUUGGUGUAGUA--------------------------------------------------- l=21 a=0 c
-----------------------------------------------------CUAGACCAAUGUUUAGUUAGU------------------------------------------------------------------------------------------------------------------- l=21 a=0 c*
--------------------------------------------------------------------------------------------------------------------------------------AGUAGUUGUCCGACUCUAUUGUUG------------------------------- l=24 a=1 ma
---------------------ACAUUUUUUAUUUAUUUAUGAUUGGACAACUACUAG------------------------------------------------------------------------------------------------------------------------------------ l=36 a=0 ma*

--------------------------------------------------------------------------------------------------------------------------------------AGUAGUUGUCCGACUCUAUUGUUG------------------------------- l=24 a=1 (ma)

mb-01010
ax-1001011
ku-01
ss-110110001000
fn-001
